Pathological rate matrices: from primates to pathogens

BMC Bioinformatics

Table 3 Exponentiation of matrices from primate protein coding exons.

Data	Norm¹	Cond¹	ϵ_TAYL¹	ϵ_EIG¹	ϵ_PADÉ¹	$E_{T A Y L}^{2}$	$E_{E I G}^{2}$	N³
Dinuc 1+2	(0.021, 0.16)	(42, 1.4e+04)	(3.1e-05, 0.00044)	(3.1e-05, 0.00044)	(3.1e-05, 0.00044)	0	17	206
Dinuc 2+3	(0.051, 0.18)	(23, 1.1e+04)	(7.1e-05, 0.00041)	(7.1e-05, 0.00041)	(7.1e-05, 0.00041)	0	3	206
Trinuc	(2.7e+02, 3.4e+02)	(2.9e+02, 2.3e+04)	(6.4e+65, 3.6e+89)	(0.22, 0.22)	(0.22, 0.22)	206	0	206
Codon	(0.15, 0.42)	(4.7e+02, inf)	(0.00049, 0.0029)	(0.0005, 0.087)	(0.00049, 0.0029)	0	62	206

¹ – median and maximum values; ² – Number of P matrices for the indicated algorithm with an invalid probability; ³ – total number of matrices.

ISSN: 1471-2105