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Table 6 Prediction results on test set

From: Prediction of protein-protein binding site by using core interface residue and support vector machine

Prediction method Sensitivity Specificity MCC
Lib-SVM 60.7% 41.9% 0.203
ProMate 9.9% 28.1% 0.007
PINUP 21.2% 39.5% 0.096
PPISP 27.7% 44.2% 0.146
  1. This table shows the prediction results of different method on the test set. The first column is the method used for site prediction. The second, third, and fourth columns are average sensitivity, specificity, and MCC over all proteins in the test set. All the statistics are perform according to the classification method which classifies residues into interface and non-interface classes.