Table 1 Details of overlaps between significant GO terms found by original clustering of microarray data, and those found by using gene signature clustering for the Spellman dataset.
From: Microarray data mining using landmark gene-guided clustering
Biological process used for landmark genes | Number of Landmark Genes | Number of Original GO terms | Number of Overlapping GO terms | Number of Unique GO terms |
|---|---|---|---|---|
proteolysis | 51 | 182 | 120 | 41 |
electron transport | 20 | 182 | 126 | 44 |
regulation of transcription | 100 | 182 | 126 | 41 |
protein biosynthesis | 194 | 182 | 101 | 20 |
carbohydrate metabolism | 121 | 182 | 142 | 58 |
signal transduction | 52 | 182 | 121 | 53 |
ubiquitin-dependent protein catabolism | 40 | 182 | 129 | 61 |