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Table 2 Likelihood values and parameter estimates for Pot II genes

From: Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors

Models p l kappa d N /d S Estimates of parameters Positive Selected Site
M0 (one-ratio) 1 -3281.13 1.706 0.262 ω = 0.262 None
M1a (NearlyNeutral) 2 -3219.57 1.986 0.551 p0 = 0.513, ω0 = 0.126 p1 = 0.487, ω1 = 1.000 Not Allowed
M2a (PostiveSelection) 4 -3201.55 2.045 0.714 p0 = 0.499, ω0 = 0.128 p1 = 0.480, ω1 = 1.000 p2 = 0.021, ω2 = 8.001 Site 5
M3 (discrete) 5 -3163.57 1.762 0.372 p0 = 0.363, ω0 = 0.041 p1 = 0.616, ω1 = 0.420 p2 = 0.021, ω2 = 4.621 Site 5
M7 (beta) 2 -3169.60 1.745 0.323 p = 0.525, q = 1.095 Not Allowed
M8 (beta&ω) 4 -3156.75 1.791 0.387 p0 = 0.979, (p1 = 0.021) p = 0.599, q = 1.450, w = 4.791 Site 5