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Table 1 Nucleotide Level Statistics.
u
i
,
j
represents the upstream regulatory sequence
j
at position
i
,
RED
is the set of annotated database positions found in the 'redfile',
B
represents a binding site predicted by method
M
.
From:
MTAP: The Motif Tool Assessment Platform
Statistic
Definition
nTP
If
u
i
,
j
exists in both
RED
and
B
.
nFN
If
u
i
,
j
exists in
RED
and not in
B
.
nFP
If
u
i
,
j
exists in
B
and not in
RED
.
nTN
If
u
i
,
j
exists in neither
RED
nor
B
.
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