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Table 2 H5N1 clades

From: Comparative structural analysis of haemagglutinin proteins from type A influenza viruses: conserved and variable features

Clade

Year

Strain name

Genomic Ac

Protein Ac

0

1996-2002

A/Goose/Guangdong/1/1996

AF144305.1

AAD51927.1

1 (c)

2002-2003

A/Quail/Shantou/3054/2002

CY028946.1

ACA47648.1

2 (c)

2005

A/Bar-headed Gooze/Qinghai/75/2005

DQ095619.1

AAZ16276.1

3

2000-2001

A/Duck/Hong Kong/2986.1/2000

AY059481.1

AAL31387.1

4

2002-2003

A/Duck/Shantou/700/2002

CY028943.1

ACA47615.1

2005-2006

5

2000-2003

A/Duck/Zhejiang/52/2000

AY585377.1

AAT12042.1

2004

6

2002-2004

A/Duck/Hubei/wg/2002

DQ997094.1

ABI94747.1

7 (c)

2002-2004

A/Chicken/Shanxi/2/2006

DQ914814.3

ABK34764.2

2005-2006

 

8

2001-2004

A/Chicken/Hong Kong/61.9/2002

AY575876.1

AAT39076.1

9

2003-2005

A/Duck/Guangxi/50/2001

AY585375.1

AAT12040.1

  1. Periods (years) of circulation, strain names (based on year and location of identification) and accession numbers (for both genomic and protein data) are reported for each clade. Circulating clades are marked by (c).