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Table 4 Results for dataset A-C 20

From: ERD: a fast and reliable tool for RNA design including constraints

 

INFO-RNA

MODENA

NUPACK

RNAiFold

ERD

Index

SC

E T

SC

E T

SC

E T

SC

SC

E T

A1

32

0.23

30

32.06

50

9.24

50

50

0.11

A2

50

0.03

45

37.57

50

5.80

50

50

0.06

A3

47

0.20

45

61.52

45

28.97

50

50

0.77

A4

0

∞

0

∞

0

∞

0

0

∞

A5

2

4130.43

38

305.61

5

17698.03

0

40

154.68

A6

12

592.57

39

309.57

50

836.15

50

50

13.06

A7

0

∞

0

∞

0

∞

0

0

∞

A8

0

∞

0

∞

45

1133.91

0

0

∞

  1. The success count (SC) and expected time (E T ) comparison between the existing approaches for dataset AC20, including 20% of sequence constraints. The ∞ represents no result and the bold faces indicate the best results.
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BMC Bioinformatics

ISSN: 1471-2105

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