Skip to main content

Table 5 Results for dataset A-C30

From: ERD: a fast and reliable tool for RNA design including constraints

 

INFO-RNA

MODENA

NUPACK

RNAiFold

ERD

Index

SC

E T

SC

E T

SC

E T

SC

SC

E T

A1

42

0.10

40

31.65

50

8.80

50

50

0.12

A2

50

0.04

41

37.52

50

3.35

50

50

0.05

A3

20

3.97

7

60.67

34

164.47

0

41

4.74

A4

0

∞

0

∞

50

479.95

0

0

∞

A5

0

∞

0

∞

0

∞

0

5

2472.85

A6

0

∞

0

∞

0

∞

0

0

∞

A7

0

∞

0

∞

0

∞

0

0

∞

A8

32

52.13

43

1124.62

25

1059.20

33

50

124.56

  1. The success count (SC) and expected time (E T ) comparison between the existing approaches for dataset A-C30, including 30% of sequence constraints. The ∞ represents no result and the bold faces indicate the best results.