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Figure 5 | BMC Bioinformatics

Figure 5

From: Exploring possible DNA structures in real-time polymerase kinetics using Pacific Biosciences sequencer data

Figure 5

Kinetics around CG repeats. These three graphs show the average polymerase kinetics for the sequence CGCGCGCGCG, found in 18 regions in the E. coli genome. A total of 746 reads were used in the analysis. The top graph shows the raw IPD values for the region, in seconds. In the middle and bottom graphs, the 2 bp (4 bp) smoothing represents wavelet smoothing over a two (four) nucleotide region within the reads. For each measurement, the black vertical lines are the 90% quantile, the grey vertical lines are the 95% quantile.

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BMC Bioinformatics

ISSN: 1471-2105

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