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Table 2 Cluster summary

From: Alignment-free clustering of transcription factor binding motifs using a genetic-k-medoids approach

  GMACS STAMP MoSta
Homogeneous 13 9 11
Heterogeneous 5 7 3
Singletons 0 2 12
Total 18 18 26
  1. Number and type of clusters automatically determined by GMACS, STAMP, and MoSta for the 79 motif JASPAR dataset originally grouped into 11 FBPs manually by Sandelin and Wasserman. GMACS achieves the highest number of homogeneous clusters while maintaining a low number of both heterogeneous clusters and singletons.