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Table 6 Protease amino acid positions with mutations in at least 50% of the sequences by kmeans cluster

From: Data-intensive analysis of HIV mutations

   Protease positions
Cluster Size 10 13 15 20 30 35 36 41 46 54 62 63 71 82 88 89 90 93
Cluster B6.1 2425             X       
Cluster B6.2 1952 X    X   X X   X X X X X X    X  
Cluster B6.3 1071   X    X X X      X X   X    
Cluster B6.4 1752        X      X       
Cluster B6.5 1663             X       
Cluster B6.6 1366 X         X    X X X    X X
Cluster C6.1 53    X X   X X     X X     X X  
Cluster C6.2 138    X     X          X   X
Cluster C6.3 114    X     X          X   X
Cluster C6.4 31   X X X X X X      X    X X   
Cluster C6.5 52 X   X X   X X    X   X X X   X X  
Cluster C6.6 16 X X X     X      X      X X
Cluster F6.1 89 X   X X X X X X        X X   
Cluster F6.2 70 X X X X   X   X    X X      X  
Cluster F6.3 81 X   X X   X   X X X   X X X    X X
Cluster F6.4 247    X    X X X         X   
Cluster F6.5 98 X   X X   X X X X X   X   X   X   
Cluster F6.6 147    X    X   X         X