Skip to main content

Table 4 Frequencies of most common confidence sets using multiple comparisons with the best with a coverage of 0.90, when drivers are known

From: Identifying restrictions in the order of accumulation of mutations during tumor progression: effects of passengers, evolutionary models, and sampling

Confidence sets Conjunction   No conjunction
  Diff PFD PND FPF   Diff PFD PND FPF
OT, OT-A 0.60 0.47 0.03 0.05   0.65 0.53 0.23 0.05
DiP, DiP-A, OT, OT-A 0.02 0.08 - 0.57   0.03 0.16 0.05 0.59
CBN, CBN-A 0.02 0.09 0.61 -   - 0.04 0.32 0.01
DiP, DiP-A - 0.04 0.01 0.17   0.01 0.02 - 0.16
CBN, CBN-A, OT, OT-A 0.02 0.02 0.07 -   0.02 0.03 0.12 0.01
DiP-A, OT, OT-A - 0.06 - 0.02   0.02 0.05 0.02 0.03
OT-A 0.16 0.09 0.06 -   0.15 0.04 0.13 -
OT 0.07 0.05 - 0.01   0.03 0.03 - -
DiP, OT - 0.04 - 0.08   0.01 0.05 - 0.08
CBN-A 0.03 - 0.06 -   - - 0.01 -
  1. Combinations not shown have a frequency less than 0.05 for all columns. Frequencies normalized by column total (N = 432).