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Table 2 Examples of gene-disease associations from BeFree with low score and supported by a large number of publications

From: Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research

Gene

Disease

Source

Score

Number of PMIDs (Number of PMIDS provided by BeFree)

TP53

Malignant Neoplasms (C0006826)

BeFree

0.06

3365

TP53

Neoplasms (C0027651)

DisGeNET

0.401

475 (401)

BRCA1

Breast Carcinoma (C0678222)

BeFree

0.06

1966

BRCA1

Malignant neoplasm of breast (C0006142)

DisGeNET

0.702

2123 (2056)

ESR1

Breast Carcinoma (C0678222)

BeFree

0.06

1553

ESR1

Malignant neoplasm of breast (C0006142)

DisGeNET

0.3

1690 (1681)

ERBB2

Breast Carcinoma (C0678222)

BeFree

0.06

1425

ERBB2

Malignant neoplasm of breast (C0006142)

DisGeNET

0.4

1493 (1484)

BRCA1

Ovarian carcinoma (C0029925)

BeFree

0.06

1389

BRCA1

Malignant Neoplasm of Ovary (C1140680)

DisGeNET

0.6

1365 (1337)

BRCA1

Ovarian Neoplasm (C0919267)

DisGeNET

0.6

144 (71)

  1. Similar associations provided by DisGeNET are indicated.