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Figure 2 | BMC Bioinformatics

Figure 2

From: Insertion and deletion correcting DNA barcodes based on watermarks

Figure 2

Transmission scheme for barcodes based on watermark codes. Consisting of three blocks: 1) outer coder, encoding index words c as code words of a linear code \(\mathcal C_{1}[\mathbb F_{q_{1}},n_{1}, k_{1}]\) and soft-decoder \(\mathcal D_{1}\). 2) inner coder, with inner code \(\mathcal C_{2}\) (for sparse sequence representation), decoder \(\mathcal D_{2}\) (providing likelihood values) and watermark sequence w (known to encoder and decoder). 3) embedding of barcodes in random context and channel with insertion, deletion and substitution errors.

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