Table 3 Comparative table of BLAST hits and capture efficiency against different databases on the e-value 1e-10
From: MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics
S.N. | Databases | BLAST | BLAST Hits | Read Matching (%) |
|---|---|---|---|---|
1. | Targeted Nucleotide Database | BLASTN | 27,131 | 20.99 |
2. | Targeted Protein Database | BLASTX | 37,329 | 28.89 |
3. | NCBI-NR | BLASTX | 66,822 | 51.72 |
4. | Uniprot | BLASTX | 65,903 | 51.00 |