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Table 3 Comparative table of BLAST hits and capture efficiency against different databases on the e-value 1e-10

From: MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics

S.N. Databases BLAST BLAST Hits Read Matching (%)
1. Targeted Nucleotide Database BLASTN 27,131 20.99
2. Targeted Protein Database BLASTX 37,329 28.89
3. NCBI-NR BLASTX 66,822 51.72
4. Uniprot BLASTX 65,903 51.00