Task | Cold Database | Hot Database | ||
---|---|---|---|---|
dbVOR | SNPpy | dbVOR | SNPpy | |
load all HapMap data | 1311 | 1053 | 1302 | 1038 |
select all 620,932 marker | 1333 | 586 | 1317 | 478 |
genotypes; write to ped file | ||||
select chromosome 1 | 117 | 188 | 98 | 111 |
genotypes; write to ped file | ||||
select chromosome 1 genotypes | 28 | 235 | 8 | 112 |
between bp 500,000 to 1,000,000; | ||||
write to ped file |