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Table 10 Short UTR collection

From: Secondary structural entropy in RNA switch (Riboswitch) identification

Start End Strand Gene Length
42325 42403 + fixA 79
246641 246712 + yafL 72
570070 570116 + ybcL 47
848134 848173 - dps 40
879876 879950 + dacC 75
989579 989637 - pncB 59
1108480 1108558 + mdoG 79
1331812 1331879 + cysB 68
1397550 1397576 - fnr 27
1570069 1570096 - gadB 28
1732381 1732459 + mepH 79
1927731 1927756 - yebE 26
2039370 2039399 + zinT 30
2268700 2268748 + rtn 49
2380676 2380735 + elaD 60
2541550 2541579 - cysP 30
2823813 2823854 + srlA 42
2982146 2982216 - kduI 71
3134393 3134425 - pitB 33
3276888 3276936 + kbaZ 49
3467875 3467918 - chiA 44
3651959 3651984 + slp 26
3735493 3735520 + malS 28
3845190 3845221 - uhpT 32
3909548 3909591 - pstS 44
4028994 4029036 - fadB 43
4213425 4213501 + aceB 77
4244442 4244487 - malE 46
4358054 4358129 - cadB 76
4492620 4492646 + indK 27
  1. 30 randomly chosen untranslated regions of lengths less than 80 nt corresponding to the σ-70 transcription factor binding sites in Escherichia coli str. K-12 substr. MG1655 (GenBankID: U00096.2). Column Start denotes start of the binding site. End denotes the downstream start codon. Gene denotes the name of the first gene in the corresponding mRNA. Length denotes the length of the UTR.