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Table 12 Classification performance

From: Secondary structural entropy in RNA switch (Riboswitch) identification

Classifier

TP%

F P 1 %

F P 2 %

Sensitivity

Sig.

LMFEGCBJK

91.3

43.5

15.4

72.9

MFE

LMFEGC

82.6

30.4

23.1

71.2

MFE

LMFEGCRND

73.9

30.4

38.5

64.4

L,MFE

LMFEGCFFTbor

82.6

30.4

23.1

71.2

-

LMFEGCShapes

87.0

34.8

23.1

71.2

-

  1. Classifier Performance. Actual length of sequences used. Column Classifier denotes features used from the training set. T P % denotes percentage of true positives. F P 1 % and F P 2 % represent the percentages of antisense sequences and E. coli UTRs that are misclassified as riboswitches, respectively. Sensitivity denotes overall percentage of correctly classified sequences. Sig. denotes significant (less than 0.05 in the training set) features of the multinomial classifier.