Classifier
|
T
P
%
|
F
P
1
%
|
F
P
3
%
|
|---|
L,MFE,GC,RND | 81.8 | 19.5 | 18.2 |
L,MFE,GC | 63.6 | 2.1 | 0 |
L,MFE,GC,BJK | 54.5 | 8.3 | 18.2 |
- Classifier performance on the eleven riboswitches in B. subtilis. Constant length of 157 nt used. Sequence segments chosen according to the scanning procedure. Intergenic regions were divided into non-overlapping 157 nt segments with most downstream segment ending at its corresponding downstream opron. Segments with maximum overlap with riboswitches were chosen as true positives. T
P
% denotes percentages of correctly classified riboswitches. F
P
1
% denotes percentage of misclassified antisense. F
P
3
% denotes percentage of misclassified negative control segments. Average and standard deviation of the MFE values for the negative control segments are −30.7 and 8.2, respectively.
