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Table 1 Results of the filtering step of FlowClus

From: FlowClus: efficiently filtering and denoising pyrosequenced amplicons

  Min. sequence length (200) Max. sequence length for elimination (600) Max. ambiguous bases allowed before truncation (0) Reverse primer removed Min. window quality score (length = 50, qual = 25.0) Total
Reads eliminated 2226 0 107 n/a 3702 6035
Reads truncated n/a n/a 1359 12486 15199 29044