Table 1 Number of DE transcripts (FDR adjusted p-value < 0.05 or posterior probability of DE > 0.95) detected by each method in the heart failure dataset
From: MetaDiff: differential isoform expression analysis using random-effects meta-regression
| Â | Unadjusted | Age-sex-adjusted | Overlap |
|---|---|---|---|
BcLR | 6 | 95 | 1 |
t-test | 1 | 0 | 0 |
DESeq | 106 | 77 | 56 |
DeSeq2 | 102 | 49 | 31 |
EdgeR | 3 | 0 | 0 |
Cuffdiff | 7 | - | - |
EBSeq | 256 | - | - |