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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Capturing coevolutionary signals inrepeat proteins

Fig. 2

The sequence identity between repeated units can bias the inference of evolutionary couplings. Repeat sequences of the ANK familywere concatenated in a MSA of size 2L 0=66 positions and ≈73000 sequences and co-variations were measured with direct information metric.a Sequence identity distributions between consecutive ANK repeats found in (x) natural proteins and (o) randomized pairs of repeats. b Direct information matrices between positions obtained without correcting (DI, upper half) or with proper equalization for repeat identity (DI id , lower half)

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