Table 4 Comparison of IDBA-UD and InteMAP on two real metagenomic data samples
From: InteMAP: Integrated metagenomic assembly pipeline for NGS short reads
| Â | IDBA-UD | InteMAP |
|---|---|---|
SRR512043 | Â | Â |
Sum of contig length (bp) | 6,545,817 | 17,134,336 |
N-len at 100 Kbp (bp) | 607 | 1,355 |
Non-redundant ORFs predicted | 16,767 | 53,542 |
SRR413680 | Â | Â |
Sum of contig length (bp) | 147,576,380 | 149,997,510 |
N-len at 10 Mbp (bp) | 112,393 | 205,465 |
Non-redundant ORFs predicted | 163,430 | 167,133 |