Table 3 The design results for the two-target Pseudobase dataset (the LE80 dataset)
From: Multi-objective optimization for RNA design with multiple target secondary structures
Pseudobase ID | l | δ e 1 | δ e 2 | n 1 | n 2 |
|---|---|---|---|---|---|
PKB00002_PKB00004 | 50 | 0.20 | 0.20 | 5 | 0 |
PKB00005_PKB00015 | 41 | 0.50 | 0.50 | 6 | 0 |
PKB00008_PKB00031 | 40 | 0.00 | 0.70 | 6 | 0 |
PKB00010_PKB00066 | 40 | 0.00 | 0.00 | 22 | 3 |
PKB00012_PKB00268 | 40 | 0.00 | 0.20 | 13 | 0 |
PKB00030_PKB00045 | 41 | 0.20 | 0.90 | 9 | 0 |
PKB00047_PKB00069 | 61 | 4.00 | 4.40 | 0 | 0 |
PKB00048_PKB00265 | 61 | 0.50 | 1.20 | 0 | 0 |
PKB00050_PKB00128 | 59 | 0.00 | 0.00 | 12 | 1 |
PKB00052_PKB00107 | 52 | 0.00 | 0.10 | 7 | 0 |
PKB00057_PKB00072 | 67 | 3.60 | 3.90 | 0 | 0 |
PKB00068_PKB00129 | 68 | 4.80 | 4.90 | 0 | 0 |
PKB00070_PKB00244 | 55 | 0.00 | 0.50 | 3 | 0 |
PKB00078_PKB00106 | 62 | 0.00 | 0.40 | 8 | 0 |
PKB00080_PKB00132 | 49 | 0.20 | 0.20 | 13 | 0 |
PKB00088_PKB00127 | 62 | 0.20 | 0.30 | 2 | 0 |
PKB00098_PKB00232 | 62 | 0.80 | 1.40 | 0 | 0 |
PKB00131_PKB00205 | 48 | 0.00 | 0.01 | 29 | 0 |
PKB00139_PKB00141 | 70 | 1.30 | 1.90 | 0 | 0 |
PKB00142_PKB00231 | 71 | 0.10 | 0.60 | 0 | 0 |
PKB00143_PKB00233 | 71 | 2.50 | 2.60 | 0 | 0 |
PKB00148_PKB00218 | 72 | 3.90 | 4.90 | 0 | 0 |
PKB00175_PKB00259 | 57 | 1.60 | 1.60 | 3 | 0 |
PKB00179_PKB00280 | 68 | 1.50 | 1.70 | 3 | 0 |
PKB00180_PKB00212 | 64 | 0.10 | 0.30 | 4 | 0 |
PKB00190_PKB00266 | 47 | 0.00 | 0.00 | 29 | 7 |
PKB00207_PKB00213 | 45 | 0.00 | 0.00 | 12 | 2 |
PKB00211_PKB00239 | 80 | 0.30 | 0.40 | 3 | 0 |
PKB00222_PKB00305 | 80 | 2.10 | 3.20 | 1 | 0 |
PKB00224_PKB00281 | 43 | 0.00 | 0.10 | 10 | 0 |
PKB00230_PKB00273 | 48 | 0.00 | 0.40 | 7 | 0 |
PKB00248_PKB00257 | 66 | 0.40 | 2.10 | 0 | 0 |
PKB00263_PKB00270 | 62 | 0.20 | 0.60 | 0 | 0 |
PKB00269_PKB00272 | 66 | 1.40 | 1.40 | 0 | 0 |
mean | - | 0.89 | 1.22 | - | - |
median | - | 0.20 | 0.55 | - | - |