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Table 5 Examples of correctly predicted missing BP functions by dRW from an older GOA file (date: 2010-01-20) to a recent GOA file (date: 2014-06-09) of Yeast and Human. hCount gives the number of proteins annotated with the term in the older GOA file. Depth represents the term’s depth in the GO hierarchy

From: Predicting protein function via downward random walks on a gene ontology

Yeast Human
Protein GO terms hCount Depth Protein GO terms hCount Depth
HIS5 GO:0001193 0 8 EZR GO:0002143 0 9
PET494 GO:0019379 0 5 TMEM200C GO:0007094 8 8
CYC1 GO:0019430 0 4 C9orf96 GO:0016056 3 7
FES1 GO:0044718 0 5 DRGX GO:0035511 0 5
MET17 GO:0090334 0 6 HDAC7 GO:0035511 0 5
TSTA3 GO:2000679 2 7 QPRT GO:0045040 0 5
     CSHL1 GO:0045040 0 5
     RGS3 GO:0060397 2 7
     PRDM7_V2 GO:0071300 0 6
     TMEM82 GO:0090050 2 7