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Table 5 List of the top five ranked Pfams as selected by the Fizzy’s Mutual Information Maximization (MIM) applied to MetaHit

From: Fizzy: feature subset selection for metagenomics

Rank

IBD features

Feature 1

ABC transporter (PF00005)

Feature 2

Phage integrase family (PF00589)

Feature 3

Glycosyl transferase family 2 (PF00535)

Feature 4

Acetyltransferase (GNAT) family (PF00583)

Feature 5

Helix-turn-helix (PF01381)

Rank

Obese features

Feature 1

ABC transporter (PF00005)

Feature 2

MatE (PF01554)

Feature 3

TonB dependent receptor (PF00593)

Feature 4

Histidine kinase-, DNA gyrase B-, and HSP90-like

 

ATPase (PF02518)

Feature 5

Response regulator receiver domain (PF00072)