Source of variation | d.f. | s.s. | m.s. | v.r. | F prob. | perm prob. | Percentage SS |
---|---|---|---|---|---|---|---|
Replicate stratum | 1 | 0.01693 | 0.01693 | 8.82 | Â | Â | Â |
Replicate.*Units* stratum | Â | Â | Â | Â | Â | Â | Â |
Length | 5 | 40.79358 | 8.15872 | 4247.34 | 0.000 | 0.001 | 1.18 |
Assembly | 2 | 1516.31545 | 758.15772 | 394688.33 | 0.000 | 0.001 | 43.90 |
Mapper | 1 | 265.90685 | 265.90685 | 138428.09 | 0.000 | 0.001 | 7.70 |
Stringency | 1 | 371.94519 | 371.94519 | 193630.46 | 0.000 | 0.001 | 10.77 |
MAPQ | 1 | 55.69223 | 55.69223 | 28992.74 | 0.000 | 0.001 | 1.61 |
Variant caller | 1 | 73.45412 | 73.45412 | 38239.38 | 0.000 | 0.001 | 2.13 |
Depth filter | 1 | 5.92562 | 5.92562 | 3084.81 | 0.000 | 0.001 | 0.17 |
Residual | 575 | 1.10452 | 0.00192 | Â | Â | Â | Â |