Table 5 Performance on HCV plasmid mixture datasets

Variant %

Pair

sens.^b

FP^c

sens.^b

FP^c

sens.^b

FP^c

sens.^b

FP^c

sens.^b

FP^c

 0.50 %

1^d

5/5

10

5/5

38

5/5

36

5/5

2

5/5

11

 0.50 %

2^e

0/5

0

0/5

0

0/5

0

0/5

0

3/5

15

 0.50 %

1 + 2^f

1/5

0

5/5

0

2/5

5

2/5

7

3/5

32

 1 %

1^d

5/5

11

5/5

53

5/5

62

5/5

2

5/5

13

 1 %

2^e

1/5

0

5/5

0

5/5

1

2/5

1

2/5

28

 1 %

1 + 2^f

3/5

1

5/5

0

5/5

7

4/5

1

3/5

45

 2 %

1^d

5/5

13

5/5

64

5/5

72

5/5

4

2/5

20

 2 %

2^e

3/5

0

5/5

0

5/5

1

3/5

0

3/5

14

 2 %

1 + 2^f

5/5

0

5/5

0

5/5

7

5/5

2

3/5

28

 10 %

1^d

5/5

6

5/5

42

5/5

75

5/5

0

3/5

10

 10 %

2^e

5/5

0

5/5

0

5/5

0

5/5

0

2/5

28

 10 %

1 + 2^f

5/5

0

5/5

0

5/5

8

5/5

1

2/5

56

time^gh

time^gh

time^gi

time^gj

time^gj

 0.50 %

1^d

2m27s

2m27s

1m30s

1h45m

8m7s

 0.50 %

2^e

2m18s

2m18s

1m33s

9h29m

22m3s

 0.50 %

1 + 2^f

4m42s

4m42s

3m36s

15h4m

2h31m

 1 %

1^d

2m56s

2m56s

2m27s

1h38m

10m51s

 1 %

2^e

3m1s

3m1s

2m6s

8h46m

46m44s

 1 %

1 + 2^f

5m48s

5m48s

5m56s

13h13m

3h46m

 2 %

1^d

2m35s

2m35s

2m6s

1h34m

10m25s

 2 %

2^e

2m32s

2m32s

1m53s

8h50m

41m1s

 2 %

1 + 2^f

4m59s

4m59s

4m34s

14h56m

1h47m

 10 %

1^d

3m5s

3m5s

4m26s

1h46m

13m45s

 10 %

2^e

2m30s

2m30s

2m35s

14h13m

33m24s

 10 %

1 + 2^f

5m29s

5m29s

9m53s

7h57m

1h47m