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Fig. 13 | BMC Bioinformatics

Fig. 13

From: MIA: Mutual Information Analyzer, a graphic user interface program that calculates entropy, vertical and horizontal mutual information of molecular sequence sets

Fig. 13

JSD histogram for HMI from shuffled sequences: maxmer with bias correction, mean = 675.6(18.2) mnat; “am” for D. americana, “am-am” for D. americana americana, “am-tx” for D. americana texana, “ana” for D. ananassae, “angor” for D. angor, “kik” for D. kikkawai, “mela” for D. melanogaster, “mira” for D. miranda, “paul” for D. paulistorum, “pbogo” for D. pseudoobscura bogotana, “persi” for D. persimilis, “pseud” for D. pseudoobscura, “sim” for D. simulans, “sturt” for D. sturtevanti, “wil” for D. willistoni, “yak” for D. yakuba. Very high distance with a very low SD can be observed for JSD[HMI] from shuffled sequences, demonstrating a regular profile very different from the original histogram

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BMC Bioinformatics

ISSN: 1471-2105

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