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Table 3 Numbers of hypo- and hyper-methylated loci identified by the proposed Bayesian method and logistic regression method for the real data. FDR is controlled at levels 0.01, 0.02, 0.03 and 0.05 for logistic regression

From: A full Bayesian partition model for identifying hypo- and hyper-methylated loci from single nucleotide resolution sequencing data

  Hypo- Hyper-  
  methylation methylation  
The proposed Bayesian method 31,328 21,270  
Logistic Regression: FDR controlled at 0.01 20,527 15,166  
Logistic Regression: FDR controlled at 0.02 24,309 17,758  
Logistic Regression: FDR controlled at 0.03 27,172 19,483  
Logistic Regression: FDR controlled at 0.05 31,863 22,419