Table 2 Analyzed 66 species with rhodophytic plastids
From: Algorithms for reconstruction of chromosomal structures
Locus in GenBank | Species | #prot | #clust | #sing |
|---|---|---|---|---|
NC_024079.1 | Asterionella formosa | 134 | 129 | 0 |
NC_024080.1 | Asterionellopsis glacialis | 145 | 138 | 1 |
NC_012898.1 | Aureococcus anophagefferens | 105 | 105 | 0 |
NC_012903.1 | Aureoumbra lagunensis | 110 | 110 | 0 |
NC_011395.1 | Babesia bovis T2Bo | 32 | 22 | 7 |
NC_021075.1 | Calliarthron tuberculosum | 201 | 200 | 1 |
NC_025313.1 | Cerataulina daemon | 132 | 130 | 0 |
NC_025310.1 | Chaetoceros simplex | 131 | 128 | 0 |
NC_020795.1 | Chondrus crispus | 204 | 204 | 0 |
NC_026522.1 | Choreocolax polysiphoniae | 71 | 71 | 0 |
NC_014340.2 | Chromera velia | 78 | 51 | 24 |
NC_014345.1 | Chromerida sp. RM11 | 81 | 69 | 5 |
NC_024081.1 | Coscinodiscus radiatus | 139 | 130 | 0 |
NC_013703.1 | Cryptomonas paramecium | 82 | 79 | 3 |
NC_004799.1 | Cyanidioschyzon merolae strain 10D | 207 | 189 | 18 |
NC_001840.1 | Cyanidium caldarium | 197 | 186 | 11 |
NC_024082.1 | Cylindrotheca closterium | 161 | 141 | 13 |
NC_024083.1 | Didymosphenia geminata | 130 | 128 | 0 |
NC_014287.1 | Durinskia baltica | 129 | 127 | 0 |
NC_013498.1 | Ectocarpus siliculosus | 148 | 143 | 1 |
NC_004823.1 | Eimeria tenella strain Penn State | 28 | 21 | 7 |
NC_007288.1 | Emiliania huxleyi | 119 | 112 | 7 |
NC_024928.1 | Eunotia naegelii | 160 | 136 | 2 |
NC_015403.1 | Fistulifera solaris | 135 | 130 | 1 |
NC_016735.1 | Fucus vesiculosus | 139 | 139 | 0 |
NC_024665.1 | Galdieria sulphuraria | 182 | 181 | 1 |
NC_023785.1 | Gracilaria salicornia | 202 | 200 | 2 |
NC_006137.1 | Gracilaria tenuistipitata var. liui | 203 | 201 | 2 |
NC_021618.1 | Grateloupia taiwanensis | 233 | 201 | 32 |
NC_000926.1 | Guillardia theta | 147 | 142 | 5 |
NC_010772.1 | Heterosigma akashiwo | 156 | 139 | 3 |
NC_014267.1 | Kryptoperidinium foliaceum | 139 | 132 | 6 |
NC_027093.1 | Lepidodinium chlorophorum | 62 | 52 | 7 |
NC_024084.1 | Leptocylindrus danicus | 132 | 130 | 0 |
NC_022667.1 | Leucocytozoon caulleryi | 30 | 30 | 0 |
NC_024085.1 | Lithodesmium undulatum | 138 | 129 | 0 |
NC_020014.1 | Nannochloropsis gaditana | 119 | 116 | 3 |
NC_022259.1 | Nannochloropsis granulata | 125 | 123 | 0 |
NC_022262.1 | Nannochloropsis limnetica | 124 | 123 | 0 |
NC_022263.1 | Nannochloropsis oceanica | 126 | 123 | 1 |
NC_022260.1 | Nannochloropsis oculata | 126 | 123 | 0 |
NC_022261.1 | Nannochloropsis salina | 123 | 123 | 0 |
NC_001713.1 | Odontella sinensis | 140 | 128 | 9 |
NC_020371.1 | Pavlova lutheri | 111 | 102 | 9 |
NC_016703.2 | Phaeocystis antarctica | 108 | 108 | 0 |
NC_021637.1 | Phaeocystis globosa | 108 | 108 | 0 |
NC_008588.1 | Phaeodactylum tricornutum | 132 | 130 | 0 |
NC_023293.1 | Plasmodium chabaudi chabaudi | 31 | 31 | 0 |
NC_000925.1 | Porphyra purpurea | 209 | 209 | 0 |
NC_023133.1 | Porphyridium purpureum | 224 | 183 | 40 |
NC_021189.1 | Pyropia haitanensis | 211 | 210 | 1 |
NC_024050.1 | Pyropia perforata | 209 | 207 | 2 |
NC_007932.1 | Pyropia yezoensis | 209 | 206 | 3 |
NC_025311.1 | Rhizosolenia imbricata | 135 | 123 | 1 |
NC_009573.1 | Rhodomonas salina | 146 | 143 | 3 |
NC_025312.1 | Roundia cardiophora | 140 | 126 | 0 |
NC_018523.1 | Saccharina japonica | 139 | 139 | 0 |
NC_014808.1 | Thalassiosira oceanica CCMP1005 | 142 | 126 | 1 |
NC_008589.1 | Thalassiosira pseudonana | 141 | 127 | 0 |
NC_025314.1 | Thalassiosira weissflogii | 141 | 127 | 0 |
NC_007758.1 | Theileria parva strain Muguga | 44 | 27 | 12 |
NC_001799.1 | Toxoplasma gondii RH | 26 | 21 | 5 |
NC_026851.1 | Trachydiscus minutus | 137 | 124 | 8 |
NC_016731.1 | Ulnaria acus | 130 | 128 | 0 |
NC_011600.1 | Vaucheria litorea | 139 | 138 | 1 |
NC_026523.1 | Vertebrata lanosa | 192 | 191 | 1 |