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Table 4 Phylogenetic reconstruction of mitochondrial chromosome structures in sporozoan class Aconoidasida

From: Algorithms for reconstruction of chromosomal structures

Tree node Chromosome structure
Theileria parvaLeucocytozoon sabrazesi ss1 cox1 *cox3 ls1 *ls3 *ss3 *ls6 ls8 ss5 (C) | *ls7 *ss6 *ss4 ls9 ss2 ls4 ls5 cytb ls2 (L)
Theileria parva–Theileria annulata *ls4 ls5 cytb ls2 ls3 *ls1 cox3 *cox1 (L)
Theileria parva (l) cox1 *cox3 ls1 *ls3 *ls2 *cytb *ls5 ls4 (L)
Babesia bovis (l) cox1 *cox3 ls1 *ls2 *ls3 *cytb *ls4 ls5 (L)
Theileria annulata (l) cox1 *cox3 ls1 *ls3 *cytb *ls5 ls4 (L)
Leucocytozoon sabrazesi (l) ls1 ss4 ss6 ls7 ls6 ss3 ls3 ls9 ss2 ls4 ls5 *cox3 ls8 ss5 ss1 cox1 cytb ls2 (L)
Plasmodium falciparum–Plasmodium vivax ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 ss1 cox1 cytb ls1 ss4 ss6 ls7 (L)
Plasmodium falciparum–Plasmodium floridense ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 ss1 cox1 cytb ls1 ss4 ss6 ls7 (L)
Plasmodium falciparum (l) ss3 ls3 ls9 ss2 *cox3 ls8 ss5 ss1 cox1 cytb ls1 ss4 ss6 ls7 (L)
Plasmodium relictum (l) ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 ss1 cox1 cytb ls1 ss4 ss6 ls7 (C)
Plasmodium floridense (l) ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 ss1 cox1 cytb ls1 ss4 ss6 ls7 (L)
Leucocytozoon fringillinarum–Plasmodium vivax ss1 cox1 cytb ls1 ss4 ss6 ls7 ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 (C)
Leucocytozoon fringillinarum (l) ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 ss1 cox1 cytb ls1 ss6 ls7 ss4 (C)
Plasmodium simium (l) ls1 ss6 ls7 ss3 ls3 ls9 ss2 ls4 *cox3 cox1 cytb ls8 ss5 ss1 (C)
Plasmodium vivax (l) ls1 ss6 ls7 ss3 ls3 ls9 ss2 ls4 *cox3 ls8 ss5 ss1 cox1 cytb (C)
  1. Reconstruction was generated by the algorithm from the Section “The first algorithm solving the reconstruction problem for structures without paralogs” for the tree in Fig. 5