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Table 1 Combination of top ranked gene sets of ORA and GGEA by rank sum (ALL microarray data)

From: Bioconductor’s EnrichmentBrowser: seamless navigation through combined results of set- & network-based enrichment analysis

ID

Title

ORA

GGEA

\(\sum \)

hsa05416

Viral myocarditis

1

1

2

hsa04520

Adherens junction

4

2

6

hsa05217

Basal cell carcinoma

9

3

12

hsa04622

RIG-I-like receptor

2

12

14

hsa04210

Apoptosis

6

10

16

hsa05202

Transcript. misreg. in cancer

7

13

20

hsa05130

Pathogenic E. coli infection

3

-

-

hsa05134

Legionellosis

5

-

-

hsa05131

Shigellosis

8

-

-

hsa05412

Arrhytm. cardiomyopathy

10

-

-

hsa05100

Invasion of epithelial cells

11

-

-

hsa04670

Leukocyte trans. migration

12

-

-

hsa05206

MicroRNAs in cancer

13

-

-

hsa04350

TGF- β signaling

-

4

-

hsa04550

Pluripotency of stem cells

-

5

-

hsa05211

Renal cell carcinoma

-

6

-

hsa04310

Wnt signaling

-

7

-

hsa04660

T cell receptor

-

8

-

hsa05144

Malaria

-

9

-

hsa04514

Cell adhesion

-

11

-

  1. Shown are the absolute ranks returned by ORA and GGEA and the resulting rank sum in the last column (see Implementation, section Combining results )