Seqinspector: position-based navigation through the ChIP-seq data landscape to identify gene expression regulators

Table 1 Top five enriched ChIP-seq tracks in the promoters of genes regulated by dexamethasone

Track ID	Transcription factor	Query coverage	Background coverage	P-value	Bonferroni-corrected P-value
GR_04	Glucocorticoid receptor	1.3	0.59	6.7 × 10^-6	0.0024
GR_03	Glucocorticoid receptor	1.3	0.64	2.2 × 10^-5	0.008
MYOG_01	Myogenin	0.096	0.059	0.0017	0.59
TCF3_01	Transcription factor 3	0.058	0.038	0.0018	0.63
FOSL1_01	Fos-related antigen 1	0.021	0.016	0.0093	1.0

Only the over-representation of GR-tracks was found statistically significant (Bonferroni corrected P < 0.05, typed in bold)

ISSN: 1471-2105