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Fig. 4 | BMC Bioinformatics

Fig. 4

From: SCOUP: a probabilistic model based on the Ornstein–Uhlenbeck process to analyze single-cell expression data during differentiation

Fig. 4

PIS of each method applied to Kouno’s data (1). The x-axis represents the noise level (ε) (see “Methods”) and the y-axis represents the degree of inconsistency between the pseudo-time and experimental time (PIS). Each method is distinguished by color: red, SCOUP; yellow, SP; green, Monocle; and blue, TSCAN. We compared the PIS of Monocle for different parameters m a x_c o m p o n e n t s, which correspond to dimensions. The solid and dotted lines correspond to m a x_c o m p o n e n t s=2 and 3, respectively

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BMC Bioinformatics

ISSN: 1471-2105

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