Fig. 6
From: Reference-free deconvolution of DNA methylation data and mediation by cell composition effects
Gene-Set Analysis (Roadmap Epigenomics WGBS). Gene-set odds ratios for 450K data sets, showing association of sets of DMPs distinguishing various Roadmap Epigenomics WGBS specimens with the set of CpGs whose values are highly variable across fitted methylomes (s 2 j > q 0.75(s 2)). Clustering heatmap obtained from log-odds-ratios and using Ward’s method of clustering (“ward.D” in R hclust function)