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Table 2 Top 5 regulators predicted by the algorithm in over expression experiments [13]

From: Interpreting transcriptional changes using causal graphs: new methods and their practical utility on public networks

  

c-Myc

     

H-Ras

     

E2F3

  

Name

Regulation

QS

CS

ES

 

Name

Regulation

QS

CS

ES

 

Name

Regulation

QS

CS

ES

MAX

up

2e-3

1e-2

1e-3

 

EGR1

up

7e-6

2e-2

8e-5

 

E2F1

up

3e-6

2e-1

4e-5

MYC

up

8e-2

4e-3

6e-1

 

JUN

up

1e-3

9e-4

9e-5

 

ADORA2B

up

3e-2

1e-1

1e-2

DNAJC3

down

1e-1

4e-1

4e-1

 

GAST

up

2e-3

2e-4

2e-3

 

RBX1

down

3e-2

2e-1

2e-2

E2F2

up

1e-1

6e-1

3e-1

 

CXCR2

up

6e-3

6e-3

1e-2

 

CDKN1A

down

7e-2

9e-1

1e-4

E2F3

up

1e-1

7e-1

3e-1

 

CSF2

up

7e-3

8e-3

1e-2

 

SKP2

down

1e-1

2e-1

1e-1

  1. FDR corrected p-values of the 3 scoring schemes are listed: Quaternary score (QS), Correctness score (CS) and Enrichment score (ES)