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Table 1 Examples of false negatives and false positives with p-values from MedNetSim

From: Fusing literature and full network data improves disease similarity computation

Disease 1 Disease 2 P-value (MedSim) P-value (NetSim) P-value (MedNetSim)
False negatives
 polycystic ovary syndrome myocardial infarction 0.663 0.004 0.051
 lipid storage disease obesity 0.107 0.148 0.070
 malaria epilepsy syndrome 0.675 0.016 0.075
 lipid storage disease diabetes mellitus 0.108 0.156 0.075
False positives
 impulse control disorder narcissistic personality disorder 0.023 0.001 0.002
 penile neoplasm cecum cancer 0.023 0.007 0.004
 pancreatic cancer tubular adenocarcinoma 0.003 0.107 0.006
 essential hypertension hyperthyroidism 0.210 0.021 0.030