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Table 3 Statistics and IAA scores for entities, relation labels, and triggers. The IAA scores for entities and relation labels were calculated using a simple percent agreement. The IAA score for relation labels was calculated using Cohen’s kappa statistic

From: A corpus for plant-chemical relationships in the biomedical domain

Phases

Entity

# of entities

# of agreements for entities (IAA, Simple)

Relation

# of class labels

# of agreements for relation labels (IAA, Kappa)

Trigger

# of triggers

# of agreements for triggers (IAA, Simple)

Phase 1

Plants

642

640 (99.7 %)

Plant–chemical

642

570 (77.6 %)

Weak

284

275 (96.8 %)

 

Chemicals

642

636 (99.1 %)

   

Strong

284

271 (95.4 %)

 

Total

1,284

1276 (99.4 %)

   

Total

568

546 (96.1 %)

Phase 2

Plants

401

401 (100.0 %)

Plant–chemical

401

369 (82.8 %)

Weak

245

234 (95.5 %)

 

Chemicals

401

400 (99.8 %)

   

Strong

245

223 (91.0 %)

 

Total

802

801 (99.9 %)

   

Total

490

457 (93.3 %)

Overall

 

2,086

2,077 (99.6 %)

 

1,043

939 (79.8 %)

 

1,058

1,003 (94.8 %)