Table 12 Comparison of prediction performance between our proposed method and other seven methods on new yeast dataset, suppressing representation bias-driven learning
From: Predicting protein-protein interactions via multivariate mutual information of protein sequences
Method | AUROC | AUPRC | ||||||
|---|---|---|---|---|---|---|---|---|
| Â | CV | C1 | C2 | C3 | CV | C1 | C2 | C3 |
MMI+NMBAC | 0.65 ±0.02 | 0.66 ±0.02 | 0.60 ±0.02 | 0.55 ±0.02 | 0.67 ±0.02 | 0.68 ±0.02 | 0.60 ±0.02 | 0.55 ±0.02 |
MMI | 0.64 ±0.02 | 0.65 ±0.01 | 0.60 ±0.02 | 0.55 ±0.02 | 0.66 ±0.02 | 0.68 ±0.01 | 0.60 ±0.02 | 0.54 ±0.02 |
NMBAC | 0.63 ±0.02 | 0.64 ±0.02 | 0.59 ±0.02 | 0.54 ±0.03 | 0.65 ±0.02 | 0.66 ±0.02 | 0.59 ±0.02 | 0.54 ±0.02 |
M1 | 0.64 ±0.01 | 0.64 ±0.01 | 0.62 ±0.02 | 0.57 ±0.04 | 0.65 ±0.01 | 0.65 ±0.01 | 0.61 ±0.02 | 0.56 ±0.03 |
M2 | 0.61 ±0.01 | 0.61 ±0.02 | 0.62 ±0.02 | 0.58 ±0.03 | 0.61 ±0.01 | 0.61 ±0.02 | 0.62 ±0.02 | 0.57 ±0.03 |
M3 | 0.54 ±0.01 | 0.55 ±0.01 | 0.53 ±0.01 | 0.50 ±0.01 | 0.60 ±0.02 | 0.60 ±0.01 | 0.56 ±0.03 | 0.53 ±0.07 |
M4 | 0.55 ±0.02 | 0.55 ±0.02 | 0.54 ±0.02 | 0.51 ±0.02 | 0.53 ±0.02 | 0.53 ±0.01 | 0.53 ±0.02 | 0.51 ±0.02 |
M5 | 0.60 ±0.02 | 0.60 ±0.01 | 0.55 ±0.02 | 0.52 ±0.02 | 0.61 ±0.02 | 0.61 ±0.01 | 0.55 ±0.02 | 0.51 ±0.02 |
M7 | 0.55 ±0.02 | 0.54 ±0.01 | 0.54 ±0.02 | 0.53 ±0.03 | 0.55 ±0.02 | 0.55 ±0.01 | 0.54 ±0.02 | 0.53 ±0.02 |