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Table 1 Performance evaluation of BIGMAC on several mock communities

From: BIGMAC : breaking inaccurate genomes and merging assembled contigs for long read metagenomic assembly

Dataset

Method

NContig

# Mis-assembly

N50

N75

1

HGAP

130

18

818655

274801

1

BIGMAC

129

7

4352719

274801

2

HGAP

477

187

397611

38471

2

BIGMAC

344

28

397611

75666

3

HGAP

185

26

257044

82370

3

BIGMAC

140

14

359704

99878

  1. BIGMAC consistently improves assembly quality by simultaneously increasing contig contiguity and decreasing the number of mis-assemblies
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BMC Bioinformatics

ISSN: 1471-2105

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