Table 1 Matthews Correlation Coefficient values relative to the classifications of the synthetic peaks produced with the indicated values for p and v and fp=0.1
From: DGW: an exploratory data analysis tool for clustering and visualisation of epigenomic marks
No DTW | |||||||||
p\v | 0.0 | 0.05 | 0.1 | 0.15 | 0.2 | 0.25 | 0.3 | 0.35 | 0.4 |
0.00 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.785 | 0.699 | 0.412 |
0.05 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.773 | 0.486 |
0.10 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.785 | 0.795 | 0.707 | 0.372 |
0.15 | 1.000 | 1.000 | 0.998 | 1.000 | 1.000 | 1.000 | 0.723 | 0.505 | 0.671 |
0.20 | 1.000 | 1.000 | 1.000 | 1.000 | 0.682 | 1.000 | 0.696 | 0.572 | 0.501 |
0.25 | 1.000 | 1.000 | 1.000 | 0.600 | 1.000 | 0.748 | 0.710 | 0.618 | 0.452 |
0.30 | 0.945 | 0.995 | 0.998 | 0.907 | 0.682 | 0.995 | 0.772 | 0.767 | 0.434 |
0.35 | 0.957 | 0.927 | 0.975 | 0.613 | 0.973 | 0.604 | 0.701 | 0.259 | 0.413 |
0.40 | 0.649 | 0.619 | 0.990 | 0.704 | 0.599 | 0.746 | 0.252 | 0.617 | 0.294 |
DTW | |||||||||
p\v | 0.0 | 0.05 | 0.1 | 0.15 | 0.2 | 0.25 | 0.3 | 0.35 | 0.4 |
0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.995 | 0.780 | 0.773 |
0.050 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.995 | 0.772 | 0.778 |
0.100 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.788 | 0.783 | 0.766 |
0.150 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.998 | 0.975 | 0.774 | 0.978 |
0.200 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.998 | 0.774 | 0.752 | 0.760 |
0.250 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.998 | 0.988 | 0.973 | 0.948 |
0.300 | 1.000 | 0.990 | 0.988 | 1.000 | 1.000 | 0.998 | 0.901 | 0.421 | 0.764 |
0.350 | 1.000 | 0.971 | 1.000 | 0.586 | 0.978 | 0.990 | 0.297 | 0.318 | 0.710 |
0.400 | 1.000 | 0.954 | 0.964 | 0.998 | 0.988 | 0.665 | 0.973 | 0.934 | 0.401 |