Table 1 All ENCODE cell-lines for which matched ChIP-seq data was available for the full set of histone modifications considered in this study (listed in Table 2)
From: Distributed gene expression modelling for exploring variability in epigenetic function
Cell-line | Tier | Description | Lineage | Tissue | Karyotype |
|---|---|---|---|---|---|
A549 | 2 | Alveolar carcinoma | Endoderm | Epithelium | Cancer |
GM12878 | 1 | B-lymphocyte | Mesoderm | Blood | Normal |
H1-hESC | 1 | Embryonic stem cells | Inner cell mass | Embryonic stem cell | Normal |
HeLa-S3 | 2 | Cervical carcinoma | Ectoderm | Cervix | Cancer |
HepG2 | 2 | Hepatocellular carcinoma | Endoderm | Liver | Cancer |
HUVEC | 2 | Umbilical vein endothelial cells | Mesoderm | Blood vessel | Normal |
K562 | 1 | Leukemia | Mesoderm | Blood | Cancer |
NHEK | 3 | Epidermal keratinocytes | Ectoderm | Skin | Normal |