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Table 7 ALL (9 subtypes) - Significance comparison of size of subnetworks induced by high-variance genes in preprocessed output; p = p-value of the frequency using first three principal components

From: GFS: fuzzy preprocessing for effective gene expression analysis

 

Raw

Scaled

Z-score

Quantile

GFS

Size

freq

p

freq

p

freq

p

freq

p

freq

p

2

87

0.672

77

0.861

76

0.876

87

0.672

80

0.071

3

44

0.621

46

0.545

41

0.722

45

0.577

67

0.000

4

24

0.483

24

0.483

24

0.483

23

0.546

39

0.000

5

18

0.105

18

0.105

18

0.105

18

0.105

16

0.001

6

3

0.890

2

0.958

4

0.804

2

0.958

11

0.000

7

9

0.025

4

0.408

3

0.588

9

0.025

4

0.029

8

2

0.492

3

0.289

4

0.144

3

0.289

4

0.013

9

5

0.017

6

0.004

4

0.057

5

0.017

1

0.170

10

3

0.062

3

0.062

4

0.021

2

0.165

5

0.000

11

3

0.038

7

0.001

7

0.001

3

0.038

2

0.015

12

1

0.289

3

0.021

2

0.092

2

0.092

3

0.001

13

1

0.230

2

0.059

4

0.007

-

-

1

0.011

14

3

0.005

1

0.203

-

-

3

0.005

2

0.000

15

1

0.193

1

0.193

1

0.193

2

0.047

2

0.002

16

1

0.124

1

0.124

2

0.031

1

0.124

2

0.000

17

1

0.122

1

0.122

-

-

1

0.122

-

-

19

-

-

-

-

-

-

-

-

1

0.000

20

-

-

-

-

-

-

-

-

1

0.000

23

1

0.006

-

-

-

-

1

0.006

-

-

24

-

-

1

0.003

1

0.003

-

-

-

-