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Table 3 Selected SVM models with increased sampling ratio

From: Predicting MoRFs in protein sequences using HMM profiles

Training sampling ratio

1:1

1:2

SVM models

AUC

Success rate

FPR

AUC

Success rate

FPR

1

0.660

0.669

0.050

0.680

0.637

0.041

2

0.600

0.770

0.180

0.613

0.730

0.175

3

0.648

0.701

0.070

0.650

0.690

0.070

4

0.659

0.649

0.053

0.680

0.620

0.042

5

0.606

0.770

0.180

0.600

0.700

0.190

6

0.653

0.680

0.065

0.654

0.680

0.063

7

0.650

0.640

0.047

0.660

0.640

0.045

8

0.600

0.749

0.180

0.610

0.726

0.175

9

0.650

0.660

0.065

0.650

0.656

0.065

  1. Bold numbers indicate performance metrics for best models
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BMC Bioinformatics

ISSN: 1471-2105

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