Predicting the recurrence of noncoding regulatory mutations in cancer

BMC Bioinformatics

Table 2 Performance of recurrent mutation prediction: Significant recurrence model

Recurrence window	Background window	Size of true set	Average AUC	Randomized AUC
20 bp	1Mbp	210	0.71	0.51
	100kbp	212	0.71	0.50
	10kbp	238	0.70	0.53
	1kbp	191	0.70	0.51
10 bp	1Mbp	114	0.78	0.55
	100kbp	114	0.78	0.51
	10kbp	133	0.76	0.46
	1kbp	99	0.76	0.49
5 bp	1Mbp	201	0.72	0.48
	100kbp	198	0.72	0.47
	10kbp	181	0.72	0.47
	1kbp	131	0.73	0.43

ISSN: 1471-2105