Table 6 Results of BUSCO annotations
L. stagnalis | S. cerevisiae | Caenorhabditis sp. | D. simulans | H. rhamnoides | N. benthamiana | D. melanogaster | C. elegans | ||
|---|---|---|---|---|---|---|---|---|---|
Illumina derived datasets | Simulated datasets | ||||||||
BUSCO dataset | Metazoa | Fungi | Metazoa | Arthropods | Plants | Arthropods | Metazoa | ||
Number of BUSCO entries | 843 | 1,438 | 843 | 2,675 | 956 | 2,675 | 843 | ||
Detected BUSCO entries | Concatenated | 822 | 1,357 | 720 | 2,455 | 903 | 934 | 1,204 | 442 |
CLC | 779 | 1,207 | 655 | 2,159 | 843 | 811 | 1,079 | 437 | |
IDBA_tran | 813 | 1,195 | 699 | 2,242 | 881 | 903 | 1,137 | 428 | |
Trinity | 811 | 1,356 | 710 | 2,424 | 887 | 927 | 1,143 | 415 | |
Duplicated copies | Concatenated | 344 | 430 | 445 | 945 | 525 | 745 | 368 | 49 |
CLC | 59 | 35 | 52 | 89 | 224 | 284 | 48 | 25 | |
IDBA_tran | 210 | 70 | 189 | 662 | 361 | 569 | 149 | 28 | |
Trinity | 259 | 155 | 324 | 520 | 389 | 633 | 291 | 42 | |
Fragmented copies | Concatenated | 19 | 53 | 16 | 143 | 20 | 5 | 89 | 54 |
CLC | 66 | 106 | 39 | 230 | 88 | 167 | 94 | 57 | |
IDBA_tran | 20 | 59 | 16 | 174 | 33 | 63 | 93 | 54 | |
Trinity | 35 | 136 | 24 | 189 | 52 | 8 | 100 | 53 | |