Fast-GBS: a new pipeline for the efficient and highly accurate calling of SNPs from genotyping-by-sequencing data

BMC Bioinformatics

Table 2 Number of variants detected among 24 soybean, barley, and potato samples. The sequencing platform, number of reads, filtering options, and genotype accuracy for each dataset are also provided

^aFiltering options: minNR minimum number of reads to call a variant (depth), MinMAF minimum minor allele frequency, and MaxMD maximum missing data allowed

ISSN: 1471-2105