Methods | Size | SN | SP | ACC | MCC | AUC |
---|---|---|---|---|---|---|
DMI | 10 | 0.7600 ±0.2119 | 0.9143 ±0.1380 | 0.8235 ±0.1301 | 0.6837 ±0.2180 | 0.8371 ±0.1187 |
 | 100 | 0.7321 ±0.1818 | 0.8807 ±0.0401 | 0.8069 ±0.0825 | 0.6264 ±0.1460 | 0.8064 ±0.0831 |
 | 1000 | 0.8119 ±0.0472 | 0.9023 ±0.0147 | 0.8564 ±0.0245 | 0.7171 ±0.0460 | 0.8571 ±0.0242 |
CLR | 10 | 0.5900 ±0.1776 | 0.4143 ±0.3125 | 0.5176 ±0.1331 | 0.0043 ±0.3125 | 0.5457 ±0.1331 |
 | 100 | 0.4854 ±0.0200 | 0.4916 ±0.0400 | 0.4885 ±0.0202 | -0.0231 ±0.04 | 0.4768 ±0.0202 |
 | 1000 | 0.5063 ±0.0134 | 0.4908 ±0.0269 | 0.4987 ±0.0135 | -0.0029 ±0.0269 | 0.4292 ±0.0135 |
PCC | 10 | 0.5600 ±0.0938 | 0.3714 ±0.1698 | 0.4824 ±0.0719 | -0.0686 ±0.1698 | 0.5386 ±0.0719 |
 | 100 | 0.5244 ±0.0268 | 0.5301 ±0.0536 | 0.5273 ±0.0268 | 0.0545 ±0.0536 | 0.5148 ±0.0268 |
 | 1000 | 0.5061 ±0.0172 | 0.4907 ±0.0344 | 0.4985 ±0.0173 | -0.0032 ±0.0344 | 0.4290 ±0.0173 |
MINET | 10 | 0.5500 ±0.0834 | 0.5571 ±0.1745 | 0.5529 ±0.0915 | 0.1076 ±0.1745 | 0.5871 ±0.0915 |
 | 100 | 0.3378 ±0.0319 | 0.6988 ±0.0351 | 0.5194 ±0.0183 | 0.0391 ±0.0351 | 0.5073 ±0.0183 |
 | 1000 | 0.2464 ±0.0164 | 0.7801 ±0.0196 | 0.5092 ±0.0096 | 0.0313 ±0.0196 | 0.4224 ±0.0096 |
TIGRESS | 10 | 0.5700 ±0.0949 | 0.3857 ±0.1355 | 0.4941 ±0.1116 | -0.0443 ±0.2304 | 0.5171 ±0.0865 |
 | 100 | 0.3154 ±0.0239 | 0.6904 ±0.0405 | 0.5040 ±0.0276 | 0.0067 ±0.0595 | 0.4898 ±0.0281 |
 | 1000 | 0.0062 ±0.0007 | 0.9941 ±0.0014 | 0.4926 ±0.0006 | 0.0024 ±0.0077 | 0.3630 ±0.0008 |
ARACNE | 10 | 0.2800 ±0.1200 | 0.7286 ±0.1966 | 0.4647 ±0.0962 | 0.0074 ±0.1966 | 0.6043 ±0.0962 |
 | 100 | 0.0598 ±0.0325 | 0.9514 ±0.0357 | 0.5083 ±0.0103 | 0.0225 ±0.0357 | 0.4860 ±0.0103 |
 | 1000 | 0.0188 ±0.0094 | 0.9820 ±0.0246 | 0.4930 ±0.0040 | 0.0023 ±0.0246 | 0.3670 ±0.0040 |
TimeDelay-ARACNE | 10 | 0.0500 ±0.1214 | 0.9571 ±0.2029 | 0.4235 ±0.0744 | 0.0222 ±0.2029 | 0.6386 ±0.0744 |
 | 100 | 0.0118 ±0.0250 | 0.9912 ±0.0596 | 0.5044 ±0.0073 | 0.0000 ±0.0596 | 0.4793 ±0.0073 |
 | 1000 | 0.0034 ±0.0028 | 0.9968 ±0.0179 | 0.4924 ±0.0015 | 0.0011 ±0.0179 | 0.3622 ±0.0015 |
GENIE3 | 10 | 0.5600 ±0.0138 | 0.3714 ±0.0419 | 0.4824 ±0.0098 | -0.0686 ±0.0419 | 0.5400 ±0.0098 |
 | 100 | 0.5093 ±0.0009 | 0.5153 ±0.0035 | 0.5123 ±0.0010 | 0.0246 ±0.0035 | 0.5007 ±0.0010 |
 | 1000 | 0.5075 ±0.0001 | 0.4922 ±0.0003 | 0.5000 ±0.0001 | -0.0003 ±0.0003 | 0.4304 ±0.0001 |
Jump3 | 10 | 0.6400 ±0.1095 | 0.4857 ±0.2048 | 0.5765 ±0.1094 | 0.1257 ±0.2048 | 0.6000 ±0.1094 |
 | 100 | 0.2606 ±0.0431 | 0.8390 ±0.0474 | 0.5515 ±0.0245 | 0.1217 ±0.0474 | 0.5471 ±0.0245 |
 | 1000 | 0.0384 ±0.0074 | 0.9843 ±0.0192 | 0.5040 ±0.0035 | 0.0694 ±0.0192 | 0.3823 ±0.0035 |
SITPR | 10 | 0.4900 ±0.1197 | 0.7143 ±0.2020 | 0.5824 ±0.0757 | 0.2172 ±0.1819 | 0.6021 ±0.0862 |
 | 100 | 0.1610 ±0.0794 | 0.8253 ±0.0656 | 0.4952 ±0.0255 | -0.0212 ±0.0733 | 0.4931 ±0.0257 |
 | 1000 | 0.2382 ±0.0509 | 0.7599 ±0.0381 | 0.4950 ±0.0118 | -0.0032 ±0.0279 | 0.4990 ±0.0114 |