Fig. 2

Screenshot of ATGC views. a Drop down menu displaying all available options. b Search output by gene name. The Table shows the transcript inferred functional annotation. Tools to define Table setting and internal searches are provided at the Table header. c Search output by ontology terms; the Table displays direct and indirect annotated features and contains a link to deploy the members associated to the feature names. d Pie charts and structured graph to explore annotation from any loaded ontology. The pie chart shows the distribution of annotation in direct children terms. The sequence counts associated to each classification take into account the possible multiple annotations; users have links to obtain the lists of sequences annotated under each term